Casey,
Is it in the 2d panel view or the VC view.
If the 2d view is skewed, then you should be able to fix your view point in the Panel>panel.cfg file.
Example:
[VIEWS]
VIEW_FORWARD_WINDOWS=MAIN_PANEL,RADIO_STACK_PANEL,GPS_PANEL,THROTTLE_PANEL
VIEW_FORWARD_ZOOM=0.5
VIEW_FORWARD_DIR=5.0, 0.0, 0.0 <<< Modify these numbers to reposition your view point
If the view from the VC is out of wack, go to your aircraft.cfg file and look for the [views] entry like this:
[Views]
eyepoint=0.800000,-1.15000,3.700000 <<< Modify these numbers