Mariereid,
Just making sure here...you are aware that if you open up the scenery.cfg with notepad / wordpad, it lists the scenery in order from top to bottom. Seems logical, right?
When you look at your scenery layer in CFS2's options menu, the display is inverted, which means that for the picture on the left, Milne Bay would be at the bottom of your scenery.cfg if you opened it in notepad / wordpad, but it displays on top when you look at it in the scenery library window.
I hope I made sense, that confused the hell out of me when I started doing this stuff years ago...
Here's my base PTO scenery.cfg, if you need it...
[General]
Title=CFS2 World
Description=CFS 2 Scenery data
Cache_Size=128M
Clean_on_Exit=TRUE
[Area.001]
Title=Default Scenery
Local=scenery
Active=TRUE
Layer=2
Required=TRUE
Remote=
[Area.002]
Title=Terrain
Local=Scenedb\World
Active=TRUE
Texture_ID=1
Layer=1
Required=TRUE
Remote=
[Area.003]
Title=CFS1 Library
Local=Scenedb\library
Active=TRUE
Layer=3
Remote=
Required=FALSE
[Area.004]
Title=Airport Facilities Data
Local=Scenedb\AFDFiles
Active=TRUE
Layer=4
Required=TRUE
Remote=
[Area.005]
Title=Scenery Ships
Local=Scenedb\Ships
Active=TRUE
Layer=5
Remote=
Required=FALSE
[Area.006]
Title=Aircraft Weapons
Local=Scenedb\weapons
Active=TRUE
Layer=6
Required=TRUE
Remote=
[Area.007]
Title=Vehicles
Local=Scenedb\veh
Active=TRUE
Layer=7
Required=TRUE
Remote=
[Area.008]
Title=Effects
Local=Scenedb\fx
Active=TRUE
Layer=8
Required=TRUE
Remote=
[Area.009]
Title=Runways
Local=Scenedb\runways
Active=TRUE
Layer=9
Required=TRUE
Remote=
[Area.010]
Title=Buildings
Local=Scenedb\inf
Active=TRUE
Layer=10
Required=TRUE
Remote=
[Area.011]
Title=FS2000_props
Local=Scenedb\fs2kprop
Active=TRUE
Layer=11
Required=TRUE
Remote=
[Area.012]
Title=Coastlines
Local=Scenedb\Coastlines
Active=TRUE
Layer=12
Required=TRUE
Remote=
[Area.013]
Title=CFS2 Coast flattens
Local=Scenedb\CFS2 Coast flattens
Active=TRUE
Layer=13
Required=TRUE
Remote=
[Area.014]
Title=DEM mesh
Local=Scenedb\DEM mesh
Active=TRUE
Layer=14
Required=TRUE
Remote=
[Area.015]
Title=DEM mesh LOD 8
Local=Scenedb\DEM mesh LOD 8
Active=TRUE
Layer=15
Required=TRUE
Remote=